deLemus - Revision history

Admin at 02:25, 15 December 2023

2023-12-15T02:25:11Z

Admin at 12:13, 23 November 2023

2023-11-23T12:13:01Z

Admin at 13:32, 16 November 2023

2023-11-16T13:32:24Z

Admin at 13:31, 16 November 2023

2023-11-16T13:31:53Z

Admin at 01:23, 10 November 2023

2023-11-10T01:23:51Z

Admin at 05:50, 6 October 2023

2023-10-06T05:50:02Z

Admin at 05:45, 29 September 2023

2023-09-29T05:45:47Z

Admin at 07:10, 15 September 2023

2023-09-15T07:10:47Z

Admin at 07:08, 15 September 2023

2023-09-15T07:08:57Z

Admin at 08:35, 5 September 2023

2023-09-05T08:35:30Z

← Older revision		Revision as of 02:25, 15 December 2023
Line 14:		Line 14:

	<tabs>		<tabs>
		+
		+	<tab name="2023.12">
		+	<htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-12.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
		+
		+	===2023.12.01-2023.12.17===
		+	{\| class="wikitable"
		+	\|-
		+	! Outlined Mutations !! Confirmed in VOC/Emerging Variants
		+	\|-
		+	\| <span style="color:burlywood;">'''L455F'''</span> \|\| EG.5.1.1
		+	\|-
		+	\| <span style="color:burlywood;">'''A475V'''</span> \|\| EG.5.1.1
		+	\|-
		+	\| <span style="color:hotpink;">'''E654K'''</span> \|\| HK.3
		+	\|}
		+
		+	</tab>

	<tab name="2023.11">		<tab name="2023.11">

@@ Line 28: / Line 28: @@
 |-
 | <span style="color:burlywood;">'''A475V'''</span> || JF.1
 |-
 | <span style="color:cornflowerblue;">'''D1153Y'''</span> || HK.3

@@ Line 18: / Line 18: @@
 <htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-11.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
-===2023.11.01-2023.11.10===
+===2023.11.01-2023.11.17===
 {| class="wikitable"
 |-

@@ Line 22: / Line 22: @@
 |-
 ! Outlined Mutations !! Confirmed in VOC/Emerging Variants
 |-
 | <span style="color:burlywood;">'''L455F'''</span> || EG.5.1.1

@@ Line 15: / Line 15: @@
 <tabs>
-<tab name="2023.10">
+<tab name="2023.11">
-<htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-10.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
+<htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-11.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
-    <div id="viewer-7" class="molstar" style="display: block; margin-left:auto; margin-right:auto; padding-bottom: 40%;"></div>
+===2023.11.01-2023.11.10===
-    <script type="text/javascript">
+{| class="wikitable"
-        molstar.Viewer.create('viewer-7', {
+|-
-            layoutIsExpanded: false,
+! Outlined Mutations !! Confirmed in VOC/Emerging Variants
-            layoutShowControls: false,
+|-
-            layoutShowRemoteState: false,
+| <span style="color:burlywood;">'''L455F'''</span> || EG.5.1.1
-            layoutShowSequence: true,
+|-
-            layoutShowLog: false,
+| <span style="color:burlywood;">'''A475V'''</span> || JF.1
-            layoutShowLeftPanel: true,
+|-
-            viewportShowExpand: true,
+</tab>
-* Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).
+<tab name="2023.10">
 ===2023.10.06===
@@ Line 63: / Line 49: @@
 <tab name="2023.09">
 <htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-09.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
 ===2023.09.08-2023.09.28===
@@ Line 125: / Line 80: @@
 <tab name="2023.08">
 <htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-08.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
 <big>Here are the recently confirmed leading mutations.</big>

← Older revision		Revision as of 05:50, 6 October 2023
Line 14:		Line 14:

	<tabs>		<tabs>
		+
		+	<tab name="2023.10">
		+	<htmltag tagname="img" src="https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/images/PublishedPlot/2023-10.png" alt="test for htmltag img" class="wikimg" style="display: block;width:100%;margin-left: auto;margin-right: auto;"></htmltag>
		+	<html>
		+	<style>
		+	.molstar {
		+	position: relative;
		+	width: 80%;
		+	padding-bottom: 56.25%;
		+	}
		+	</style>
		+	<link rel="stylesheet" type="text/css" href="https://molstar.org/viewer/molstar.css" />
		+	<script type="text/javascript" src="https://molstar.org/viewer/molstar.js"></script>
		+
		+	<div id="viewer-7" class="molstar" style="display: block; margin-left:auto; margin-right:auto; padding-bottom: 40%;"></div>
		+	<script type="text/javascript">
		+	molstar.Viewer.create('viewer-7', {
		+	layoutIsExpanded: false,
		+	layoutShowControls: false,
		+	layoutShowRemoteState: false,
		+	layoutShowSequence: true,
		+	layoutShowLog: false,
		+	layoutShowLeftPanel: true,
		+
		+	viewportShowExpand: true,
		+	viewportShowSelectionMode: false,
		+	viewportShowAnimation: false,
		+	}).then(viewer => {
		+	viewer.loadSnapshotFromUrl('https://wiki.laviebay.hkust.edu.hk/deLemus/RESEARCH_TEAMS/pdb/LM_2023_07.molx', 'molx');
		+	});
		+	</script>
		+	</html>
		+
		+	* Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).
		+
		+	===2023.10.06===
		+	{\| class="wikitable"
		+	\|-
		+	! Outlined Mutations !! Confirmed in VOC/Emerging Variants
		+	\|-
		+	\| <span style="color:burlywood;">'''L455F'''</span> \|\| EG.5.1.1
		+	\|-
		+	\| <span style="color:burlywood;">'''A475V'''</span> \|\| GK.1
		+	\|}
		+
		+	</tab>

	<tab name="2023.09">		<tab name="2023.09">

@@ Line 49: / Line 49: @@
 * Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).
-===2023.09.08===
+===2023.09.08-2023.09.28===
 {| class="wikitable"
 |-
@@ Line 60: / Line 60: @@
 | <span style="color:burlywood;">'''S494P'''</span> || EG.5.1.1
 |-
-| <span style="color:hotpink;">'''E554K'''</span> || BA.2.86 (Pirola)
+| <span style="color:burlywood;">'''P521S'''</span> || XBB.1.16.15
 |-
 | <span style="color:hotpink;">'''P621S'''</span> || BA.2.86 (Pirola)
 |-
 | <span style="color:cornflowerblue;">'''S939F'''</span> || BA.2.86 (Pirola)
 |}

← Older revision		Revision as of 07:08, 15 September 2023
Line 48:		Line 48:

	* Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).		* Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).
		+
		+	===2023.09.08===
		+	{\| class="wikitable"
		+	\|-
		+	! Outlined Mutations !! Confirmed in VOC/Emerging Variants
		+	\|-
		+	\| <span style="color:burlywood;">'''R403K'''</span> \|\| BA.2.86 (Pirola)
		+	\|-
		+	\| <span style="color:burlywood;">'''L455F'''</span> \|\| EG.5.1.1
		+	\|-
		+	\| <span style="color:burlywood;">'''S494P'''</span> \|\| EG.5.1.1 (Eris)
		+	\|-
		+	\| <span style="color:hotpink;">'''E554K'''</span> \|\| BA.2.86 (Pirola)
		+	\|-
		+	\| <span style="color:hotpink;">'''P621S'''</span> \|\| BA.2.86 (Pirola)
		+	\|-
		+	\| <span style="color:cornflowerblue;">'''S939F'''</span> \|\| BA.2.86 (Pirola)
		+	\|}

	</tab>		</tab>

@@ Line 48: / Line 48: @@
 * Generated 3D structure of spike protein with highlighted leading mutations (AlphaFold2, colab version 2022).
 </tab>
@@ Line 111: / Line 109: @@
 ''*The reported mutations of detected variants are from Cov-Lineages<ref name="Cov-Lineages" />''
 </br>
 </tab>